Cannon, R.C., Hasselmo, M.E. and Koene, R.A. (2003). From biophysics to behavior: Catacomb2 and the Design of Biologically Plausable Models for Spatial Navigation. Neuroinformatics. Vol. 1:1, pp. 3-42.
Koene, R.A. (2010). Wole Brain Emulation: Issues of scope and resolution, and the need for new methods of in-vivo recording. Presented at the Third Conference on Artificial General Intelligence (AGI2010). March, 2010. Lugano, Switzerland.
Koene, R.A. (2010). Neural mechanisms of reinforcement learning: How spreading activity in the prefrontal cortex can implement RL for goal-directed tasks. Presented at the Third Conference on Artificial General Intelligence (AGI2010). March, 2010. Lugano, Switzerland.
Koene, R.A. (2011). AGI and Neuroscience: Open Sourcing the Brain. Presented at the Fourth Conference on Artificial General Intelligence (AGI2011). August, 2011. Mountain View, CA.
Koene, R.A. (2011). AGI and Neuroscience: Open Sourcing the Brain. Presented at the Fourth Conference on Artificial General Intelligence (AGI2011). August, 2011. Mountain View, CA. Reduced version (as included in the Proceedings).
Koene, R. and Takane, Y. (1999). Discriminant component pruning. Regularization and interpretation of multi-layered back-propagation networks. Neural Computation. Vol. 11, pp. 783-802.
Koene, R.A., Gorchetchnikov, A., Cannon, R.C. and Hasselmo, M.E. (2003). Modeling goal-directed spatial navigation in the rat based on physiological data from the hippocampal formation. Neural Networks. Vol. 16:5-6, pp. 577-584.
Koene, R.A. (2009). Assessing the Abstraction Level for Neuroprosthesis: Proposing a Comparison of Functional Simulations in Neuronal Circuitry Generated to Resemble Large-Scale High-Resolution Reconstructions. In NER '09. 4th International IEEE/EMBS Conference on Neural Engineering, pp.92-95, doi: 10.1109/NER.2009.5109242.
Koene, R.A., Gorchetchnikov, A., Cannon, R.C. and Hasselmo, M.E. (2003). Modeling goal-directed spatial navigation in the rat based on physiological data from the hippocampal formation. Neural Networks. Vol. 16:5-6, pp. 577-584.
Koene, R.A. et al. (2009). NETMORPH: A framework for the stochastic generation of large scale neuronal networks with realistic neuron morphologies. Neuroinformatics. Vol.7(3), pp.195-210. Neuroinformatics Advanced Access published on August 12, 2009, doi: 10.1007/s12021-009-9052-3.
Koene, R.A. and Hasselmo, M.E. (2005). An integrate and fire model of prefrontal cortex neuronal activity during performance of goal-directed decision making. Cerebral Cortex. Vol.15:12, pp.1964-1981. (Cerebral Cortex Advanced Access published April 27, 2005.)
Koene, R.A. and Hasselmo, M.E. (2008). Reversed and forward buffering of behavioral spike sequences enables retrospective and prospective retrieval in hippocampal regions CA3 and CA1. Neural Networks. Vol.21(2-3), pp.276-288. Neural Networks Advanced Access published on December 11, 2007, doi:10.1016/j.neunet.2007.12.029.
Koene, R.A. and Hasselmo, M.E. (2008). Consequences of parameter differences in a model of short-term persistent spiking buffers provided by pyramidal cells in entorhinal cortex. Brain Research. Vol.1202C, pp.54-67. Brain Research Advanced Access published on July 17, 2007, doi:10.1016/j.brainres.2007.06.067.
Koene, R.A. and Hasselmo, M.E. (2007). First-in-first-out item replacement in a model of short-term memory based on persistent spiking. Cerebral Cortex.. Vol.17(8), pp.1766-1781. Cerebral Cortex Advanced Access published on October 9, 2006, doi: 10.1093/cercor/bhl088.
McGaughy, J., Koene, R.A., Eichenbaum, H. and Hasselmo, M.E. (2005). Cholinergic deafferentation of the entorhinal cortex in rats impairs encoding of novel but not familiar stimuli in a delayed nonmatch-to-sample task. Journal of Neuroscience. Vol.25(44), pp.10273-10281.
